Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region

Mango (Mangifera indica L.) is an important species of the family Anacardiaceae and is one of the economical value crops in many parts of the world. Hence, the phylogeny study of this crop is crucial as a step for improvement of its breeding programs. Phylogenetic relationships among 13 Mangifera in...

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Main Author:	Mohd. Arif, Shahkila
Format:	Thesis
Language:	English
Published:	2013
Subjects:	QH Natural history
Online Access:	http://eprints.utm.my/id/eprint/33228/1/ShahkilaMohdArifMFBSK2013.pdf
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id	my-utm-ep.33228
record_format	uketd_dc
spelling	my-utm-ep.332282017-09-14T00:07:23Z Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region 2013-01 Mohd. Arif, Shahkila QH Natural history Mango (Mangifera indica L.) is an important species of the family Anacardiaceae and is one of the economical value crops in many parts of the world. Hence, the phylogeny study of this crop is crucial as a step for improvement of its breeding programs. Phylogenetic relationships among 13 Mangifera indica species from Malaysia, Indonesia and Taiwan were inferred by comparing DNA sequence data sets derived from the Internal Transcribed Spacer (ITS) region of nuclear ribosomal DNA (nrDNA) and analyzed using maximum parsimony (MP) method. The results showed that the cultivars were clustered into two major groups. The first group had low bootstrap value which consisted of Malaysian cultivars. The second group divided into two subclades, the first subclade consisted mainly of Taiwan cultivars. The second subclade further divided into two small subclades, which comprised of Indonesian cultivars in the first small subclade and Malaysian cultivar (1) and Indonesian cultivars (2) in another one. The findings suggested that some cultivars had a close relationship with each other even it is originates from different countries which gives better insight with regards to the relationship among these cultivars, thus providing useful information for generating new cultivar. 2013-01 Thesis http://eprints.utm.my/id/eprint/33228/ http://eprints.utm.my/id/eprint/33228/1/ShahkilaMohdArifMFBSK2013.pdf application/pdf en public masters Universiti Teknologi Malaysia, Faculty of Biosciences and Medical Engineering Faculty of Biosciences and Medical Engineering
institution	Universiti Teknologi Malaysia
collection	UTM Institutional Repository
language	English
topic	QH Natural history
spellingShingle	QH Natural history Mohd. Arif, Shahkila Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region
description	Mango (Mangifera indica L.) is an important species of the family Anacardiaceae and is one of the economical value crops in many parts of the world. Hence, the phylogeny study of this crop is crucial as a step for improvement of its breeding programs. Phylogenetic relationships among 13 Mangifera indica species from Malaysia, Indonesia and Taiwan were inferred by comparing DNA sequence data sets derived from the Internal Transcribed Spacer (ITS) region of nuclear ribosomal DNA (nrDNA) and analyzed using maximum parsimony (MP) method. The results showed that the cultivars were clustered into two major groups. The first group had low bootstrap value which consisted of Malaysian cultivars. The second group divided into two subclades, the first subclade consisted mainly of Taiwan cultivars. The second subclade further divided into two small subclades, which comprised of Indonesian cultivars in the first small subclade and Malaysian cultivar (1) and Indonesian cultivars (2) in another one. The findings suggested that some cultivars had a close relationship with each other even it is originates from different countries which gives better insight with regards to the relationship among these cultivars, thus providing useful information for generating new cultivar.
format	Thesis
qualification_level	Master's degree
author	Mohd. Arif, Shahkila
author_facet	Mohd. Arif, Shahkila
author_sort	Mohd. Arif, Shahkila
title	Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region
title_short	Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region
title_full	Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region
title_fullStr	Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region
title_full_unstemmed	Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region
title_sort	molecular phylogeny of selected mango cultivars based on internal transcribed spacer (its) region
granting_institution	Universiti Teknologi Malaysia, Faculty of Biosciences and Medical Engineering
granting_department	Faculty of Biosciences and Medical Engineering
publishDate	2013
url	http://eprints.utm.my/id/eprint/33228/1/ShahkilaMohdArifMFBSK2013.pdf
_version_	1747816110451851264

Molecular phylogeny of selected mango cultivars based on internal transcribed spacer (ITS) region

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